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Самый цитируемый биологический институт РФ *

Шатский Иван Николаевич

профессор, доктор химических наук
Статьи
  1. Andreev D.E., O'Connor P.B.F, Zhdanov A.V., Dmitriev R.I., Shatsky I.N., Papkovsky D.B., Baranov P.V. (2015) Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutes. Genome Biol., 16: . >>

  2. Andreev D.E., O'Connor P.B.F, Fahey C., Kenny E.M., Terenin I.M., Dmitriev S.E., Cormican P., Morris D.W., Shatsky I.N., Baranov P.V. (2015) Translation of 5' leaders is pervasive in genes resistant to eIF2 repression. eLife, 4: . >>

  3. Shatsky I.N., Dmitriev S.E., Andreev D.E., Terenin I.M. (2014) Transcriptome-wide studies uncover the diversity of modes of mRNA recruitment to eukaryotic ribosomes. Crit. Rev. Biochem. Mol. Biol., 49 (2): 164-177. >>

  4. Terenin I.M., Andreev D.E., Dmitriev S.E., Shatsky I.N. (2013) A novel mechanism of eukaryotic translation initiation that is neither m(7)G-cap-, nor IRES-dependent. Nucleic Acids Res., 41 (3): 1807-1816. >>

  5. Andreev D.E., Dmitriev S.E., Terenin I.M., Shatsky I.N. (2013) Cap-independent translation initiation of Apaf-1 mRNA based on a scanning mechanism is determined by some features of the secondary structure of its 5 ' untranslated region. Biochem.-Moscow, 78 (2): 157-165. >>

  6. Malygin A.A., Shatsky I.N., Karpova G.G. (2013) Proteins of the human 40S ribosomal subunit involved in hepatitis C IRES Binding as revealed from fluorescent labeling. Biochem.-Moscow, 78 (1): 53-59. >>

  7. Andreev D.E., Dmitriev S.E., Zinovkin R., Terenin I.M., Shatsky I.N. (2012) The 5 ' untranslated region of Apaf-1 mRNA directs translation under apoptosis conditions via a 5 ' end-dependent scanning mechanism. FEBS Lett., 586 (23): 4139-4143. >>

  8. Andreev D.E., Hirnet J., Terenin I.M., Dmitriev S.E., Niepmann M., Shatsky I.N. (2012) Glycyl-tRNA synthetase specifically binds to the poliovirus IRES to activate translation initiation. Nucleic Acids Res., 40 (12): 5602-5614. >>

  9. Dmitriev S.E., Stolboushkina E.A., Terenin I.M., Andreev D.E., Garber M.B., Shatsky I.N. (2011) Archaeal Translation Initiation Factor aIF2 Can Substitute for Eukaryotic eIF2 in Ribosomal Scanning during Mammalian 48S Complex Formation. Journal of Molecular Biology, 413 (1): 106-114.

  10. Vassilenko K.S., Alekhina O.M., Dmitriev S.E., Shatsky I.N., Spirin A.S. (2011) Unidirectional constant rate motion of the ribosomal scanning particle during eukaryotic translation initiation. Nucleic Acids Research, 39 (13): 5555-5567.

  11. Shatsky I.N., Dmitriev S.E., Terenin I.M., Andreev D.E. (2010) Cap- and IRES-Independent Scanning Mechanism of Translation Initiation as an Alternative to the Concept of Cellular IRESs. Molecules and Cells, 30 (4): 285-293.

  12. Dmitriev S.E., Terenin I.M., Andreev D.E., Ivanov P.A., Dunaevsky J.E., Merrick W.C., Shatsky I.N. (2010) GTP-independent tRNA Delivery to the Ribosomal P-site by a Novel Eukaryotic Translation Factor. Journal of Biological Chemistry, 285 (35): 26779-26787.

  13. Bung C., Bochkaeva Z., Terenin I., Zinovkin R., Shatsky I.N., Niepmann M. (2010) Influence of the hepatitis C virus 3 '-untranslated region on IRES-dependent and cap-dependent translation initiation. FEBS Letters, 584 (4): 837-842.

  14. Malygin A.A., Bochkaeva Z.V., Bondarenko E.I., Kossinova O.A., Loktev V.B., Shatsky I.N., Karpova G.G. (2009) Binding of the IRES of hepatitis C virus RNA to the 40S ribosomal subunit: Role of p40. Molecular Biology, 43 (6): 997-1003.

  15. Andreev D.E., Dmitriev S.E., Terenin I.M., Prassolov V.S., Merrick W.C., Shatsky I.N. (2009) Differential contribution of the m(7)G-cap to the 5' end-dependent translation initiation of mammalian mRNAs. Nucleic Acids Research, 37 (18): 6135-6147.

  16. Dmitriev S.E., Andreev D.E., Adyanova Z.V., Terenin I.M., Shatsky I.N. (2009) Efficient cap-dependent translation of mammalian mRNAs with long and highly structured 5'-untranslated regions in vitro and in vivo. Molecular Biology, 43 (1): 108-113.

  17. Babaylova E.S., Graifer D.M., Malygin A.A., Shatsky I.N., Shtahl I., Karpova G. (2009) Molecular environment of the IIId subdomain of the IRES element of hepatitits C virus RNA on the human 40S ribosomal subunit. Russian Journal of Bioorganic Chemistry, 35 (1): 94-102.

  18. Terenin I.M., Dmitriev S.E., Andreev D.E., Shatsky I.N. (2008) Eukaryotic translation initiation machinery can operate in a bacterial-like mode without eIF2. Nature Structural and Molecular Biology, 15 (8): 836-841.

  19. Andreev D.E., Fernandez-miragall O., Ramajo J., Dmitriev S.E., Terenin I.M., Martinez-salas E., Shatsky I.N. (2007) Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot- and-mouth disease virus RNA. RNA-Publ. RNA Soc., 13 (8): 1366-1374.

  20. Dmitriev S.E., Andreev D.E., Terenin I.M., Olovnikov I.A., Prassolov V.S., Merrick W.C., Shatsky I.N. (2007) Efficient translation initiation directed by the 900-nucleotide-long and GC-rich 5 ' untranslated region of the human retrotransposon LINE-1 mRNA is strictly cap dependent rather than internal ribosome entry site mediated. Molecular and Cellular Biology, 27 (13): 4685-4697.

  21. Andreev D.E., Terenin I.M., Dmitriev S.E., Shatsky I.N. (2006) Similar features in mechanisms of translation initiation of mRNAS in eukaryotic and prokaryotic systems. Molecular Biology, 40 (4): 694-702.

  22. Laletina E.S., Graifer D.M., Malygin A.A., Shatsky I.N., Karpova G.G. (2006) Molecular environment of the subdomain IIIe loop of the RNA IRES element of hepatitis C virus on the human 40S ribosomal subunit. Russian Journal of Bioorganic Chemistry, 32 (3): 280-287.

  23. Andreev D.E., Terenin I.M., Dunaevsky Y.E., Dmitriev S.E., Shatsky I.N. (2006) A leaderless mRNA can bind to mammalian 80S ribosomes and direct polypeptide synthesis in the absence of translation initiation factors. Molecular and Cellular Biology, 26 (8): 3164-3169.

  24. Terenin I.M., Dmitriev S.E., Andreev D.E., Royall E., Belsham G.J., Roberts L.O., Shatsky I.N. (2005) A cross-kingdom internal ribosome entry site reveals a simplified mode of internal ribosome entry. Molecular and Cellular Biology, 25 (17): 7879-7888.

  25. Pisarev A.V., Chard L.S., Kaku Y., Johns H.L., Shatsky I.N., Belsham G.J. (2004) Functional and structural similarities between the internal ribosome entry sites of hepatitis C virus and porcine teschovirus, a picornavirus. Journal of Virology, 78 (9): 4487-4497.

  26. Pisarev A.V., Dmitriev S.E., Shatsky I.N. (2004) Mutual effects of translation initiation factors in binding to the IRES of the encephalomyocarditis virus RNA. Molecular Biology, 38 (2): 261-265.

  27. Dmitriev S.E., Terenin I.M., Dunaevsky Y.E., Merrick W.C., Shatsky I.N. (2003) Assembly of 48S translation initiation complexes from purified components with mRNAs that have some base pairing within their 5 ' untranslated regions. Molecular and Cellular Biology, 23 (24): 8925-8933.

  28. Malygin A.A., Graifer D.M., Laletina E.S., Shatsky I.N., Karpova G.G. (2003) An approach to identifying the functionally important RNA sites by complementary addressed modification. Molecular Biology, 37 (6): 873-879.

  29. Zolotukhin A.S., Michalowski D., Bear J., Smulevitch S.V., Traish A.M., Peng R., Patton J., Shatsky I.N., Felber B.K. (2003) PSF acts through the human immunodeficiency virus type 1 mRNA instability elements to regulate virus expression. Molecular and Cellular Biology, 23 (18): 6618-6630.

  30. Rubtsova M.P., Sizova D.V., Dmitriev S.E., Ivanov D.S., Prassolov V.S., Shatsky I.N. (2003) Distinctive properties of the 5 '-untranslated region of human Hsp70 mRNA. Journal of Biological Chemistry, 278 (25): 22350-22356.

  31. Dmitriev S.E., Terenin I.M., Rubtsova M.P., Shatsky I.N. (2003) Minor secondary-structure variation in the 5 '-untranslated region of the beta-globin mRNA changes the concentration requirements for eIF2. Molecular Biology, 37 (3): 421-428.

  32. Dmitriev S.E., Pisarev A.V., Rubtsova M.P., Dunaevsky Y.E., Shatsky I.N. (2003) Conversion of 48S translation preinitiation complexes into 80S initiation complexes as revealed by toeprinting. FEBS Letters, 533 (1): 99-104.

  33. Pisarev A.V., Skabkin M.A., Thomas A.A., Merrick W.C., Ovchinnikov L.P., Shatsky I.N. (2002) Positive and negative effects of the major mammalian messenger ribonucleoprotein p50 on binding of 40 S ribosomal subunits to the initiation codon of beta-globin mRNA. Journal of Biological Chemistry, 277 (18): 15445-15451.

  34. Shatsky I.N. (2001) Molecular mechanisms of translation initiation in mammals studied by in vitro reconstruction of initiation complexes. Molecular Biology, 35 (4): 536-543.

  35. Pestova T.V., Kolupaeva V.G., Lomakin I.B., Pilipenko E.V., Shatsky I.N., Agol V.I., Hellen C.U.T. (2001) Molecular mechanisms of translation initiation in eukaryotes. Proceedings of the National Academy of Sciences of the United States of America, 98 (13): 7029-7036.

  36. Ostareck D.H., Ostareck-lederer A., Shatsky I.N., Hentze M.W. (2001) Lipoxygenase mRNA silencing in erythroid differentiation: The 3 ' UTR regulatory complex controls 60S ribosomal subunit joining. Cell, 104 (2): 281-290.

  37. Sizova D.V., Shatsky I.N. (2000) Internal ribosome entry sites of viral and cellular RNAs. Molecular Biology, 34 (2): 157-167.

  38. Kolupaeva V.G., Pestova T.V., Hellen C.U.T., Shatsky I.N. (1998) Translation eukaryotic initiation factor 4G recognizes a specific structural element within the internal ribosome entry site of encephalomyocarditis virus RNA. Journal of Biological Chemistry, 273 (29): 18599-18604.

  39. Sizova D.V., Kolupaeva V.G., Pestova T.V., Shatsky I.N., Hellen C.U.T. (1998) Specific interaction of eukaryotic translation initiation factor 3 with the 5 ' nontranslated regions of hepatitis C virus and classical swine fever virus RNAs. Journal of Virology, 72 (6): 4775-4782.

  40. Pestova T.V., Shatsky I.N., Fletcher S.P., Jackson R.T., Hellen C.U.T. (1998) A prokaryotic-like mode of cytoplasmic eukaryotic ribosome binding to the initiation codon during internal translation initiation of hepatitis C and classical swine fever virus RNAs. Development, 12 (1): 67-83.

  41. Kolupaeva V.G., Hellen C.U.T., Shatsky I.N. (1996) Structural analysis of the interaction of the pyrimidine tract-binding protein with the internal ribosomal entry site of encephalomyocarditis virus and foot-and-mouth disease virus RNAs. RNA-Publ. RNA Soc., 2 (12): 1199-1212.

  42. Pestova T.V., Hellen C.U.T., Shatsky I.N. (1996) Canonical eukaryotic initiation factors determine initiation of translation by internal ribosomal entry. Molecular and Cellular Biology, 16 (12): 6859-6869.

  43. Pestova T.V., Shatsky I.N., Hellen C.U.T. (1996) Functional dissection of eukaryotic initiation factor 4F: The 4A subunit and the central domain of the 4G subunit are sufficient to mediate internal entry of 43S preinitiation complexes. Molecular and Cellular Biology, 16 (12): 6870-6878.

  44. Flynn A., Shatsky I.N., Proud C.G., Kaminski A. (1994) The RNA-Binding Properties of Protein-Synthesis Initiation-Factor Eif-2. Biochimica et Biophysica Acta-Gene Structure and Expression, 1219 (2): 293-301.

  45. Balakin A.G., Skripkin E.A., Shatsky I.N., Bogdanov A.A. (1992) Unusual Ribosome Binding-Properties of Messenger-RNA Encoding Bacteriophage-Lambda Repressor. Nucleic Acids Research, 20 (3): 563-571.

  46. Borovjagin A.V., Ezrokhi M.V., Rostapshov V.M., Ugarova T.Y., Bystrova T.F., Shatsky I.N. (1991) RNA - Protein Interactions Within the Internal Translation Initiation Region of Encephalomyocarditis Virus-Rna. Nucleic Acids Research, 19 (18): 4999-5005.

  47. Borovjagin A.V., Ezrokhi M.V., Rostapshov V.M., Ugarova T.Y., Bystrova T.F., Shatsky I.N. (1991) RNA - Protein Interactions Within the Internal Translation Initiation Region of Encephalomyocarditis Virus-Rna. Nucleic Acids Research, 19 (18): 4999-5005.

  48. Bakin A.V., Borisova O.F., Shatsky I.N., Bogdanov A.A. (1991) Spatial-Organization of Template Polynucleotides on the Ribosome Determined by Fluorescence Methods. Journal of Molecular Biology, 221 (2): 441-453.

  49. Shatsky I.N., Bakin A.V., Bogdanov A.A., Vasiliev V.D. (1991) How Does the Messenger-RNA Pass Through the Ribosome. Biochimie, 73 (7): 937-945.

  50. Borovjagin A.V., Evstafieva A.G., Ugarova T.Y., Shatsky I.N. (1990) A Factor That Specifically Binds to the 5'-Untranslated Region of Encephalomyocarditis Virus-RNA. FEBS Letters, 261 (2): 237-240.

  51. Shatsky I.N., Vasiliev V.D. (1988) Electron-Microscopy Studies of Ribosomal-RNA. Methods in Enzymology, 164: 76-91.

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